BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005A10LP1|AL425317
(982 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1745 1845 0.0
>3x_Contig1745
Length = 19830
Score = 1845 bits (927), Expect = 0.0
Identities = 974/987 (98%), Gaps = 5/987 (0%)
Strand = Plus / Minus
Query: 1 gatcataagtgctgaagacagaaaaaatctctgagtttgaggcacccctccagcataact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19238 gatcataagtgctgaagacagaaaaaatctctgagtttgaggcacccctccagcataact 19179
Query: 61 taaatagatttgtctgagaactttgtgctaattctggtgttgtattgcgagtytgatttt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 19178 taaatagatttgtctgagaactttgtgctaattctggtgttgtattgcgagtctgatttt 19119
Query: 121 gatcaaatctgagtagattcaaaaagttccaatccgtag-tgatatgtatatgtwatccc 179
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 19118 gatcaaatctgagtagattcaaaaagttccaatccgtaggtgatatgtatatgtaatccc 19059
Query: 180 tgatgttaaccagatcagcatcaaaatttgtgtcatctgtgttaggtaccatttcggttt 239
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 19058 tgatgttaaccagatcagcatcaaaatttgtgtcatctgtgtcaggtaccatttcggttt 18999
Query: 240 gttctcctcctgctaatgttccagagccggtctgtgtatggccagagttgaattgtgtat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18998 gttctcctcctgctaatgttccagagccggtctgtgtatggccagagttgaattgtgtat 18939
Query: 300 atgcatcattgttggtgttgttgttgttgttgttgttgttactattattcctggagatga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18938 atgcatcattgttggtgttgttgttgttgttgttgttgttactattattcctggagatga 18879
Query: 360 cattattatgtgacaagttatcagagctattcatattctccgtagtacgtttacgtacag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18878 cattattatgtgacaagttatcagagctattcatattctccgtagtacgtttacgtacag 18819
Query: 420 tattggccaaactttctttcacactctgatatagttttttttggtcgaaacccgtatcag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18818 tattggccaaactttctttcacactctgatatagttttttttggtcgaaacccgtatcag 18759
Query: 480 ttataaaattgttttggacatcgggtgcmaaccttttgatttgagataaagtattgcttg 539
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 18758 ttataaaattgttttggacatcgggtgcaaaccttttgatttgagataaagtattgcttg 18699
Query: 540 attcagtacctgccaaagagcctgtagagccaaacgattgtgtcattgggtatacgtgag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18698 attcagtacctgccaaagagcctgtagagccaaacgattgtgtcattgggtatacgtgag 18639
Query: 600 ttagaggtgtagatgcgaagtttaagttttgggattgaaattgttgttgtgatgattgtt 659
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18638 taagaggtgtagatgcgaagtttaagttttgggattgaaattgttgttgtgatgattgtt 18579
Query: 660 gtgcctgtcgcgcatgttgttcttgttgctgttgttgctgttgtagcagcmacgaggatg 719
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 18578 gtgcctgtcgcgcatgttgttcttgttgctgttgttgctgttgtagcagcaacgaggatg 18519
Query: 720 ctgcattagactcttgtttggctttggtatttgaatcgacatctaattggtttgttgaat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18518 ctgcattagactcttgtttggctttggtatttgaatcgacatctaattggtttgttgaat 18459
Query: 780 catcctgttgatttgtataattaatcaggttttgagtagaatcaacagttaaaggtggca 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18458 catcctgttgatttgtataattaatcaggttttgagtagaatcaacagttaaaggtggca 18399
Query: 840 gcgatcgtattccactagtagtacttacagcaccggcagaccccgagttattgggctgtt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18398 gcgatcgtattccactagtagtacttacagcaccggcagaccccgagttattgggctgtt 18339
Query: 900 ggtggtggtagggtgcag-mgcaggtatagag-cttttaatgatg-mtatgctattgaa- 955
|||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||
Sbjct: 18338 ggtggtggtagggtgcagcagcaggtatagagccttttaatgatgcatatgctattgaac 18279
Query: 956 catggggagctgcggttcggttgaacc 982
|||||||||||||||||||||||||||
Sbjct: 18278 catggggagctgcggttcggttgaacc 18252
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8903
Number of Sequences: 1807
Number of extensions: 8903
Number of successful extensions: 792
Number of sequences better than 1.0e-20: 1
length of query: 982
length of database: 10,358,551
effective HSP length: 16
effective length of query: 966
effective length of database: 10,329,639
effective search space: 9978431274
effective search space used: 9978431274
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)